BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009A03LP1|AL425957
(835 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1409 1626 0.0
>3x_Contig1409
Length = 9404
Score = 1626 bits (820), Expect = 0.0
Identities = 833/836 (99%), Gaps = 1/836 (0%)
Strand = Plus / Plus
Query: 1 gatcagaaaaaacatcattagagttaaaaagacttgttgtagcaccaaggtatatcccga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4908 gatcagaaaaaacatcattagagttaaaaagacttgttgtagcaccaaggtatatcccga 4967
Query: 61 caagacaagcttgtataaatccaagaccgtaagtatagttcgctatagagaaaatacgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4968 caagacaagcttgtataaatccaagaccgtaagtatagttcgctatagagaaaatacgat 5027
Query: 121 ttgatggacttagttgcaatgtctctttcaacactttacattgatttaataacagcgaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5028 ttgatggacttagttgcaatgtctctttcaacactttacattgatttaataacagcgaat 5087
Query: 181 ggttcataacaatatgtaaatctttgaaagaatcgcgatctttgtttatccatattaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5088 ggttcataacaatatgtaaatctttgaaagaatcgcgatctttgtttatccatattaaac 5147
Query: 241 atggatcttccggttttgacgctggtccaaatttattggtgatggcagactt-gaattgt 299
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5148 atggatcttccggttttgacgctggtccaaatttattggtgatggcagactttgaattgt 5207
Query: 300 gataaactcaaattgtttttcaattttactttacttgtaatagtggtcttgggaattctg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5208 gataaactcaaattgtttttcaattttactttacttgtaatagtggtcttgggaattctg 5267
Query: 360 tatttgaaaggctttagcgcttgtgatattcttgtattctgttctaaagtggcatgtact 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5268 tatttgaaaggctttagcgcttgtgatattcttgtattctgttctaaagtggcatgtact 5327
Query: 420 ttgtgatcgacaaatattcttttgacgttgtatgattcgatgatgttaagaaagaatgag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5328 ttgtgatcgacaaatattcttttgacgttgtatgattcgatgatgttaagaaagaatgag 5387
Query: 480 acttcttgttcaatatcagactctgataaaataggaagcgggataacaatgaaattgcaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5388 acttcttgttcaatatcagactctgataaaataggaagcgggataacaatgaaattgcaa 5447
Query: 540 ataaggcacgttattacaatagcaacgtattcaacagagttctggcacataattattact 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5448 ataaggcacgttattacaatagcaacgtattcaacagagttctggcacataattattact 5507
Query: 600 cgatcgcccttttttagtggtgtcttcgactcaacaatcttttttgcaaatgcagcgatt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5508 cgatcgcccttttttagtggtgtcttcgactcaacaatcttttttgcaaatgcagcgatt 5567
Query: 660 atgccatcgaatgatttccaagagtgtcttacgtttgtattgtttggtggagaaccacca 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5568 atgccatcgaatgatttccaagagtgtcttacgtttgtattgtttggtggagaaccacca 5627
Query: 720 ccagtgctgaatgcaaaatcatttggctgctgacttactctgaaattcaatatgtcaagt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5628 ccagtgctgaatgcaaaatcatttggctgctgacttactctgaaattcaatatgtcaagt 5687
Query: 780 atcgacttaaacgcgctttagttctttcctgttcgagagttcgttgaggaatggcg 835
|||||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 5688 atcgacttaaacgcgcttaagttctttcctgttcgagagtccgttgaggaatggcg 5743
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7212
Number of Sequences: 1807
Number of extensions: 7212
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 835
length of database: 10,358,551
effective HSP length: 16
effective length of query: 819
effective length of database: 10,329,639
effective search space: 8459974341
effective search space used: 8459974341
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)